------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
((XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100,(Xarb30043004,XarbfragariaeLMG19145)n2)n1;

Gene Tree: 
(((((((((((((((XarbjuglandisCFBP7179_J17901763,(((XarbjuglandisDW3F3_J3F302470,(XarbjuglandisXaj417_J41702880,(((XarbjuglandisNCPPB1447_J44701730,XarbjuglandisCFBP2528_J52802229)m25,XarbjuglandisCPBF1521_J52102971)m24,XarbjuglandisCPBF427_J42702384)m23)m21)m19,XarbjuglandisCFBP8253_J25301112)m18,XarbjuglandisJ303_J30302650)m17)m15,(XarbzantedeschiaeCFBP7410_Z41002485,XarbarracaciaeCFBP7407_A40702679)m32)m14,XarbfragariaeLMG19146_F14601898)m13,XarbcorylinaCFBP1159_C15901408)m12,XarbpruniCFBP3894_P89401974)m11,XarbpruniIVIA26261_P26102662)m10,XarbcorylinaCFBP2565_C56500856)m9,XarbcorylinaNCCB100457_C45703271)m8,XarbfragariaeCFBP6762_F76200029)m7,XarbcelebensisNCPPB1630_C63001185)m6,XarbcelebensisNCPPB1832_C83200716)m5,((((Xarb30043004_X00403079,XarbfragariaeLMG19145_F14503203)m47,XarbfragariaeLMG19144_F14400487)m46,XarbfragariaeCFBP6773_F77301562)m45,(XarbguizotiaeCFBP7408_G40800565,XarbguizotiaeCFBP7409_G40900277)m52)m44)m4,((XarbjuglandisCPBF426_J42601312,XarbjuglandisCPBF367_J36700906)m56,XarbpopuliCFBP3123_P12302725)m55)m3,XgardineriSM40611_X61101978)m2,XarbpopuliCFBP3122_P12203189)m1;

Reconciliation:
XarbjuglandisCFBP7179_J17901763: Leaf Node
XarbjuglandisDW3F3_J3F302470: Leaf Node
XarbjuglandisXaj417_J41702880: Leaf Node
XarbjuglandisNCPPB1447_J44701730: Leaf Node
XarbjuglandisCFBP2528_J52802229: Leaf Node
m25 = LCA[XarbjuglandisNCPPB1447_J44701730, XarbjuglandisCFBP2528_J52802229]: Speciation, Mapping --> 100
XarbjuglandisCPBF1521_J52102971: Leaf Node
m24 = LCA[XarbjuglandisNCPPB1447_J44701730, XarbjuglandisCPBF1521_J52102971]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> 100
XarbjuglandisCPBF427_J42702384: Leaf Node
m23 = LCA[XarbjuglandisNCPPB1447_J44701730, XarbjuglandisCPBF427_J42702384]: Speciation, Mapping --> 100
m21 = LCA[XarbjuglandisXaj417_J41702880, XarbjuglandisCPBF427_J42702384]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> 100
m19 = LCA[XarbjuglandisDW3F3_J3F302470, XarbjuglandisCPBF427_J42702384]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> XarbjuglandisDW3F3
XarbjuglandisCFBP8253_J25301112: Leaf Node
m18 = LCA[XarbjuglandisDW3F3_J3F302470, XarbjuglandisCFBP8253_J25301112]: Speciation, Mapping --> 98
XarbjuglandisJ303_J30302650: Leaf Node
m17 = LCA[XarbjuglandisDW3F3_J3F302470, XarbjuglandisJ303_J30302650]: Speciation, Mapping --> 100
m15 = LCA[XarbjuglandisCFBP7179_J17901763, XarbjuglandisJ303_J30302650]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41002485: Leaf Node
XarbarracaciaeCFBP7407_A40702679: Leaf Node
m32 = LCA[XarbzantedeschiaeCFBP7410_Z41002485, XarbarracaciaeCFBP7407_A40702679]: Speciation, Mapping --> 25
m14 = LCA[XarbjuglandisCFBP7179_J17901763, XarbarracaciaeCFBP7407_A40702679]: Speciation, Mapping --> 25
XarbfragariaeLMG19146_F14601898: Leaf Node
m13 = LCA[XarbjuglandisCFBP7179_J17901763, XarbfragariaeLMG19146_F14601898]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> 25
XarbcorylinaCFBP1159_C15901408: Leaf Node
m12 = LCA[XarbjuglandisCFBP7179_J17901763, XarbcorylinaCFBP1159_C15901408]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbcorylinaCFBP1159
XarbpruniCFBP3894_P89401974: Leaf Node
m11 = LCA[XarbjuglandisCFBP7179_J17901763, XarbpruniCFBP3894_P89401974]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> XarbfragariaeLMG19146
XarbpruniIVIA26261_P26102662: Leaf Node
m10 = LCA[XarbjuglandisCFBP7179_J17901763, XarbpruniIVIA26261_P26102662]: Speciation, Mapping --> 100
XarbcorylinaCFBP2565_C56500856: Leaf Node
m9 = LCA[XarbjuglandisCFBP7179_J17901763, XarbcorylinaCFBP2565_C56500856]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> 100
XarbcorylinaNCCB100457_C45703271: Leaf Node
m8 = LCA[XarbjuglandisCFBP7179_J17901763, XarbcorylinaNCCB100457_C45703271]: Speciation, Mapping --> 100
XarbfragariaeCFBP6762_F76200029: Leaf Node
m7 = LCA[XarbjuglandisCFBP7179_J17901763, XarbfragariaeCFBP6762_F76200029]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeCFBP6762
XarbcelebensisNCPPB1630_C63001185: Leaf Node
m6 = LCA[XarbjuglandisCFBP7179_J17901763, XarbcelebensisNCPPB1630_C63001185]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> 100
XarbcelebensisNCPPB1832_C83200716: Leaf Node
m5 = LCA[XarbjuglandisCFBP7179_J17901763, XarbcelebensisNCPPB1832_C83200716]: Speciation, Mapping --> 100
Xarb30043004_X00403079: Leaf Node
XarbfragariaeLMG19145_F14503203: Leaf Node
m47 = LCA[Xarb30043004_X00403079, XarbfragariaeLMG19145_F14503203]: Speciation, Mapping --> n2
XarbfragariaeLMG19144_F14400487: Leaf Node
m46 = LCA[Xarb30043004_X00403079, XarbfragariaeLMG19144_F14400487]: Transfer, Mapping --> XarbfragariaeLMG19144, Recipient --> n2
XarbfragariaeCFBP6773_F77301562: Leaf Node
m45 = LCA[Xarb30043004_X00403079, XarbfragariaeCFBP6773_F77301562]: Transfer, Mapping --> XarbfragariaeLMG19144, Recipient --> XarbfragariaeCFBP6773
XarbguizotiaeCFBP7408_G40800565: Leaf Node
XarbguizotiaeCFBP7409_G40900277: Leaf Node
m52 = LCA[XarbguizotiaeCFBP7408_G40800565, XarbguizotiaeCFBP7409_G40900277]: Speciation, Mapping --> 100
m44 = LCA[Xarb30043004_X00403079, XarbguizotiaeCFBP7409_G40900277]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeLMG19144
m4 = LCA[XarbjuglandisCFBP7179_J17901763, XarbguizotiaeCFBP7409_G40900277]: Transfer, Mapping --> 100, Recipient --> 100
XarbjuglandisCPBF426_J42601312: Leaf Node
XarbjuglandisCPBF367_J36700906: Leaf Node
m56 = LCA[XarbjuglandisCPBF426_J42601312, XarbjuglandisCPBF367_J36700906]: Speciation, Mapping --> 100
XarbpopuliCFBP3123_P12302725: Leaf Node
m55 = LCA[XarbjuglandisCPBF426_J42601312, XarbpopuliCFBP3123_P12302725]: Transfer, Mapping --> 100, Recipient --> XarbpopuliCFBP3123
m3 = LCA[XarbjuglandisCFBP7179_J17901763, XarbpopuliCFBP3123_P12302725]: Transfer, Mapping --> 100, Recipient --> 100
XgardineriSM40611_X61101978: Leaf Node
m2 = LCA[XarbjuglandisCFBP7179_J17901763, XgardineriSM40611_X61101978]: Speciation, Mapping --> 78
XarbpopuliCFBP3122_P12203189: Leaf Node
m1 = LCA[XarbjuglandisCFBP7179_J17901763, XarbpopuliCFBP3122_P12203189]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 52 (Duplications: 0, Transfers: 15, Losses: 7)
Total number of optimal solutions: 128
Total number of candidates for gene birth: 1