------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
((((((((((((((((((((((((XarbpruniIVIA26261_P26101982,XarbpruniCFBP3894_P89403638)m24,((XarbguizotiaeCFBP7408_G40802890,XarbguizotiaeCFBP7409_G40902132)m28,((XarbjuglandisCPBF367_J36701672,XarbjuglandisCPBF426_J42602714)m32,XarbpopuliCFBP3123_P12301609)m31)m27)m23,XarbarracaciaeCFBP7407_A40701992)m22,XarbcorylinaCFBP1159_C15901639)m21,XarbcorylinaNCCB100457_C45701343)m20,((XarbzantedeschiaeCFBP7410_Z41000537,XgardineriSM40611_X61103906)m40,XarbfragariaeCFBP6762_F76201071)m39)m19,XarbcorylinaCFBP2565_C56504113)m18,XarbcelebensisNCPPB1630_C63003125)m17,XarbcelebensisNCPPB1832_C83201500)m16,XarbfragariaeLMG19144_F14401928)m15,XarbfragariaeLMG19145_F14501072)m14,XarbfragariaeLMG19146_F14602262)m13,XarbfragariaeCFBP6773_F77303308)m12,XarbjuglandisCFBP8253_J25303945)m11,XarbjuglandisJ303_J30303825)m10,XarbjuglandisDW3F3_J3F300349)m9,XarbjuglandisXaj417_J41700487)m8,XarbjuglandisCPBF427_J42702099)m7,XarbjuglandisNCPPB1447_J44702345)m6,XarbjuglandisCPBF1521_J52104061)m5,XarbjuglandisCFBP2528_J52800682)m4,XarbpopuliCFBP3122_P12202199)m3,XarbjuglandisCFBP7179_J17901264)m2,Xarb30043004_X00403772)m1;

Reconciliation:
XarbpruniIVIA26261_P26101982: Leaf Node
XarbpruniCFBP3894_P89403638: Leaf Node
m24 = LCA[XarbpruniIVIA26261_P26101982, XarbpruniCFBP3894_P89403638]: Speciation, Mapping --> 100
XarbguizotiaeCFBP7408_G40802890: Leaf Node
XarbguizotiaeCFBP7409_G40902132: Leaf Node
m28 = LCA[XarbguizotiaeCFBP7408_G40802890, XarbguizotiaeCFBP7409_G40902132]: Speciation, Mapping --> 100
XarbjuglandisCPBF367_J36701672: Leaf Node
XarbjuglandisCPBF426_J42602714: Leaf Node
m32 = LCA[XarbjuglandisCPBF367_J36701672, XarbjuglandisCPBF426_J42602714]: Speciation, Mapping --> 100
XarbpopuliCFBP3123_P12301609: Leaf Node
m31 = LCA[XarbjuglandisCPBF367_J36701672, XarbpopuliCFBP3123_P12301609]: Speciation, Mapping --> 100
m27 = LCA[XarbguizotiaeCFBP7408_G40802890, XarbpopuliCFBP3123_P12301609]: Speciation, Mapping --> 100
m23 = LCA[XarbpruniIVIA26261_P26101982, XarbpopuliCFBP3123_P12301609]: Transfer, Mapping --> 100, Recipient --> 100
XarbarracaciaeCFBP7407_A40701992: Leaf Node
m22 = LCA[XarbpruniIVIA26261_P26101982, XarbarracaciaeCFBP7407_A40701992]: Transfer, Mapping --> 100, Recipient --> XarbarracaciaeCFBP7407
XarbcorylinaCFBP1159_C15901639: Leaf Node
m21 = LCA[XarbpruniIVIA26261_P26101982, XarbcorylinaCFBP1159_C15901639]: Transfer, Mapping --> 100, Recipient --> XarbcorylinaCFBP1159
XarbcorylinaNCCB100457_C45701343: Leaf Node
m20 = LCA[XarbpruniIVIA26261_P26101982, XarbcorylinaNCCB100457_C45701343]: Transfer, Mapping --> XarbcorylinaNCCB100457, Recipient --> 100
XarbzantedeschiaeCFBP7410_Z41000537: Leaf Node
XgardineriSM40611_X61103906: Leaf Node
m40 = LCA[XarbzantedeschiaeCFBP7410_Z41000537, XgardineriSM40611_X61103906]: Transfer, Mapping --> XgardineriSM40611, Recipient --> XarbzantedeschiaeCFBP7410
XarbfragariaeCFBP6762_F76201071: Leaf Node
m39 = LCA[XarbzantedeschiaeCFBP7410_Z41000537, XarbfragariaeCFBP6762_F76201071]: Transfer, Mapping --> XgardineriSM40611, Recipient --> XarbfragariaeCFBP6762
m19 = LCA[XarbpruniIVIA26261_P26101982, XarbfragariaeCFBP6762_F76201071]: Transfer, Mapping --> XarbcorylinaNCCB100457, Recipient --> XgardineriSM40611
XarbcorylinaCFBP2565_C56504113: Leaf Node
m18 = LCA[XarbpruniIVIA26261_P26101982, XarbcorylinaCFBP2565_C56504113]: Speciation, Mapping --> 100
XarbcelebensisNCPPB1630_C63003125: Leaf Node
m17 = LCA[XarbpruniIVIA26261_P26101982, XarbcelebensisNCPPB1630_C63003125]: Transfer, Mapping --> 100, Recipient --> XarbcelebensisNCPPB1630
XarbcelebensisNCPPB1832_C83201500: Leaf Node
m16 = LCA[XarbpruniIVIA26261_P26101982, XarbcelebensisNCPPB1832_C83201500]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> 100
XarbfragariaeLMG19144_F14401928: Leaf Node
m15 = LCA[XarbpruniIVIA26261_P26101982, XarbfragariaeLMG19144_F14401928]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeLMG19144
XarbfragariaeLMG19145_F14501072: Leaf Node
m14 = LCA[XarbpruniIVIA26261_P26101982, XarbfragariaeLMG19145_F14501072]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeLMG19145
XarbfragariaeLMG19146_F14602262: Leaf Node
m13 = LCA[XarbpruniIVIA26261_P26101982, XarbfragariaeLMG19146_F14602262]: Speciation, Mapping --> 100
XarbfragariaeCFBP6773_F77303308: Leaf Node
m12 = LCA[XarbpruniIVIA26261_P26101982, XarbfragariaeCFBP6773_F77303308]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> 100
XarbjuglandisCFBP8253_J25303945: Leaf Node
m11 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisCFBP8253_J25303945]: Transfer, Mapping --> XarbjuglandisCFBP8253, Recipient --> XarbfragariaeCFBP6773
XarbjuglandisJ303_J30303825: Leaf Node
m10 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisJ303_J30303825]: Transfer, Mapping --> XarbjuglandisCFBP8253, Recipient --> XarbjuglandisJ303
XarbjuglandisDW3F3_J3F300349: Leaf Node
m9 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisDW3F3_J3F300349]: Transfer, Mapping --> XarbjuglandisCFBP8253, Recipient --> XarbjuglandisDW3F3
XarbjuglandisXaj417_J41700487: Leaf Node
m8 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisXaj417_J41700487]: Speciation, Mapping --> 98
XarbjuglandisCPBF427_J42702099: Leaf Node
m7 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisCPBF427_J42702099]: Speciation, Mapping --> 100
XarbjuglandisNCPPB1447_J44702345: Leaf Node
m6 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisNCPPB1447_J44702345]: Transfer, Mapping --> XarbjuglandisNCPPB1447, Recipient --> 100
XarbjuglandisCPBF1521_J52104061: Leaf Node
m5 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisCPBF1521_J52104061]: Transfer, Mapping --> XarbjuglandisNCPPB1447, Recipient --> XarbjuglandisCPBF1521
XarbjuglandisCFBP2528_J52800682: Leaf Node
m4 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisCFBP2528_J52800682]: Speciation, Mapping --> 100
XarbpopuliCFBP3122_P12202199: Leaf Node
m3 = LCA[XarbpruniIVIA26261_P26101982, XarbpopuliCFBP3122_P12202199]: Transfer, Mapping --> 100, Recipient --> XarbpopuliCFBP3122
XarbjuglandisCFBP7179_J17901264: Leaf Node
m2 = LCA[XarbpruniIVIA26261_P26101982, XarbjuglandisCFBP7179_J17901264]: Speciation, Mapping --> 100
Xarb30043004_X00403772: Leaf Node
m1 = LCA[XarbpruniIVIA26261_P26101982, Xarb30043004_X00403772]: Transfer, Mapping --> 100, Recipient --> Xarb30043004

The minimum reconciliation cost is: 61 (Duplications: 0, Transfers: 19, Losses: 4)
Total number of optimal solutions: 288
Total number of candidates for gene birth: 2