------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
(((((((((((((((XarbcelebensisNCPPB1630_C63000820,XarbcelebensisNCPPB1832_C83203919)m15,(XarbarracaciaeCFBP7407_A40700390,XarbfragariaeLMG19146_F14600399)m18)m14,XarbpruniCFBP3894_P89402082)m13,XarbjuglandisCFBP2528_J52801718)m12,XarbjuglandisNCPPB1447_J44701468)m11,XarbjuglandisXaj417_J41703361)m10,XarbjuglandisJ303_J30301506)m9,XarbjuglandisCFBP7179_J17900548)m8,((XarbcorylinaCFBP2565_C56502450,((((XarbcorylinaNCCB100457_C45703445,(XarbcorylinaCFBP1159_C15901290,(XarbjuglandisCPBF1521_J52101512,XarbpruniIVIA26261_P26103509)m37)m35)m33,XarbjuglandisCPBF427_J42701319)m32,XarbjuglandisDW3F3_J3F301486)m31,XarbjuglandisCFBP8253_J25301714)m30)m28,XarbfragariaeCFBP6762_F76202844)m27)m7,XarbzantedeschiaeCFBP7410_Z41001014)m6,(XarbpopuliCFBP3123_P12302533,XarbpopuliCFBP3122_P12203017)m45)m5,(((XarbfragariaeLMG19144_F14400194,(XarbfragariaeLMG19145_F14502520,XarbfragariaeCFBP6773_F77301844)m52)m50,Xarb30043004_X00400771)m49,(XarbguizotiaeCFBP7409_G40901125,XarbguizotiaeCFBP7408_G40801823)m56)m48)m4,XgardineriSM40611_X61103961)m3,XarbjuglandisCPBF426_J42603496)m2,XarbjuglandisCPBF367_J36700685)m1;

Reconciliation:
XarbcelebensisNCPPB1630_C63000820: Leaf Node
XarbcelebensisNCPPB1832_C83203919: Leaf Node
m15 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbcelebensisNCPPB1832_C83203919]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbcelebensisNCPPB1630
XarbarracaciaeCFBP7407_A40700390: Leaf Node
XarbfragariaeLMG19146_F14600399: Leaf Node
m18 = LCA[XarbarracaciaeCFBP7407_A40700390, XarbfragariaeLMG19146_F14600399]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbarracaciaeCFBP7407
m14 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbfragariaeLMG19146_F14600399]: Speciation, Mapping --> 100
XarbpruniCFBP3894_P89402082: Leaf Node
m13 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbpruniCFBP3894_P89402082]: Transfer, Mapping --> 100, Recipient --> XarbpruniCFBP3894
XarbjuglandisCFBP2528_J52801718: Leaf Node
m12 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisCFBP2528_J52801718]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> 100
XarbjuglandisNCPPB1447_J44701468: Leaf Node
m11 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisNCPPB1447_J44701468]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41703361: Leaf Node
m10 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisXaj417_J41703361]: Transfer, Mapping --> 98, Recipient --> 100
XarbjuglandisJ303_J30301506: Leaf Node
m9 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisJ303_J30301506]: Speciation, Mapping --> 100
XarbjuglandisCFBP7179_J17900548: Leaf Node
m8 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisCFBP7179_J17900548]: Speciation, Mapping --> 100
XarbcorylinaCFBP2565_C56502450: Leaf Node
XarbcorylinaNCCB100457_C45703445: Leaf Node
XarbcorylinaCFBP1159_C15901290: Leaf Node
XarbjuglandisCPBF1521_J52101512: Leaf Node
XarbpruniIVIA26261_P26103509: Leaf Node
m37 = LCA[XarbjuglandisCPBF1521_J52101512, XarbpruniIVIA26261_P26103509]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbpruniIVIA26261
m35 = LCA[XarbcorylinaCFBP1159_C15901290, XarbpruniIVIA26261_P26103509]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbcorylinaCFBP1159
m33 = LCA[XarbcorylinaNCCB100457_C45703445, XarbpruniIVIA26261_P26103509]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbcorylinaNCCB100457
XarbjuglandisCPBF427_J42701319: Leaf Node
m32 = LCA[XarbcorylinaNCCB100457_C45703445, XarbjuglandisCPBF427_J42701319]: Speciation, Mapping --> 100
XarbjuglandisDW3F3_J3F301486: Leaf Node
m31 = LCA[XarbcorylinaNCCB100457_C45703445, XarbjuglandisDW3F3_J3F301486]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisDW3F3
XarbjuglandisCFBP8253_J25301714: Leaf Node
m30 = LCA[XarbcorylinaNCCB100457_C45703445, XarbjuglandisCFBP8253_J25301714]: Speciation, Mapping --> 100
m28 = LCA[XarbcorylinaCFBP2565_C56502450, XarbjuglandisCFBP8253_J25301714]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> 100
XarbfragariaeCFBP6762_F76202844: Leaf Node
m27 = LCA[XarbcorylinaCFBP2565_C56502450, XarbfragariaeCFBP6762_F76202844]: Transfer, Mapping --> XarbfragariaeCFBP6762, Recipient --> XarbcorylinaCFBP2565
m7 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbfragariaeCFBP6762_F76202844]: Speciation, Mapping --> 25
XarbzantedeschiaeCFBP7410_Z41001014: Leaf Node
m6 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbzantedeschiaeCFBP7410_Z41001014]: Speciation, Mapping --> 25
XarbpopuliCFBP3123_P12302533: Leaf Node
XarbpopuliCFBP3122_P12203017: Leaf Node
m45 = LCA[XarbpopuliCFBP3123_P12302533, XarbpopuliCFBP3122_P12203017]: Speciation, Mapping --> 100
m5 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbpopuliCFBP3122_P12203017]: Transfer, Mapping --> 100, Recipient --> 25
XarbfragariaeLMG19144_F14400194: Leaf Node
XarbfragariaeLMG19145_F14502520: Leaf Node
XarbfragariaeCFBP6773_F77301844: Leaf Node
m52 = LCA[XarbfragariaeLMG19145_F14502520, XarbfragariaeCFBP6773_F77301844]: Transfer, Mapping --> 56, Recipient --> XarbfragariaeLMG19145
m50 = LCA[XarbfragariaeLMG19144_F14400194, XarbfragariaeCFBP6773_F77301844]: Speciation, Mapping --> 100
Xarb30043004_X00400771: Leaf Node
m49 = LCA[XarbfragariaeLMG19144_F14400194, Xarb30043004_X00400771]: Transfer, Mapping --> Xarb30043004, Recipient --> 100
XarbguizotiaeCFBP7409_G40901125: Leaf Node
XarbguizotiaeCFBP7408_G40801823: Leaf Node
m56 = LCA[XarbguizotiaeCFBP7409_G40901125, XarbguizotiaeCFBP7408_G40801823]: Speciation, Mapping --> 100
m48 = LCA[XarbfragariaeLMG19144_F14400194, XarbguizotiaeCFBP7408_G40801823]: Transfer, Mapping --> Xarb30043004, Recipient --> 100
m4 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbguizotiaeCFBP7408_G40801823]: Transfer, Mapping --> Xarb30043004, Recipient --> 100
XgardineriSM40611_X61103961: Leaf Node
m3 = LCA[XarbcelebensisNCPPB1630_C63000820, XgardineriSM40611_X61103961]: Transfer, Mapping --> Xarb30043004, Recipient --> XgardineriSM40611
XarbjuglandisCPBF426_J42603496: Leaf Node
m2 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisCPBF426_J42603496]: Transfer, Mapping --> XarbjuglandisCPBF426, Recipient --> Xarb30043004
XarbjuglandisCPBF367_J36700685: Leaf Node
m1 = LCA[XarbcelebensisNCPPB1630_C63000820, XarbjuglandisCPBF367_J36700685]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 63 (Duplications: 0, Transfers: 18, Losses: 9)
Total number of optimal solutions: 576
Total number of candidates for gene birth: 1