------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
(((((((((((((((XarbjuglandisCFBP2528_J52802696,(((((XarbfragariaeLMG19146_F14602844,XarbfragariaeCFBP6762_F76200628)m21,(XarbzantedeschiaeCFBP7410_Z41000055,XarbfragariaeCFBP6773_F77302414)m24)m20,XarbcelebensisNCPPB1832_C83201045)m19,XarbarracaciaeCFBP7407_A40700243)m18,XarbjuglandisCFBP7179_J17902205)m17)m15,XarbjuglandisCPBF1521_J52100892)m14,XarbjuglandisNCPPB1447_J44703855)m13,XarbjuglandisCPBF427_J42701487)m12,XarbjuglandisXaj417_J41702532)m11,XarbjuglandisDW3F3_J3F302926)m10,XarbjuglandisJ303_J30303078)m9,XarbjuglandisCFBP8253_J25300616)m8,((XarbpruniCFBP3894_P89400037,XarbpruniIVIA26261_P26103347)m38,((XarbcorylinaCFBP1159_C15900141,XarbcorylinaCFBP2565_C56501239)m42,XarbcorylinaNCCB100457_C45702514)m41)m37)m7,(XarbguizotiaeCFBP7408_G40800359,XarbguizotiaeCFBP7409_G40903590)m46)m6,XarbcelebensisNCPPB1630_C63001507)m5,((Xarb30043004_X00402048,XarbfragariaeLMG19144_F14401315)m51,XarbfragariaeLMG19145_F14501584)m50)m4,((XarbjuglandisCPBF367_J36701231,XarbjuglandisCPBF426_J42601643)m56,XarbpopuliCFBP3123_P12301953)m55)m3,XgardineriSM40611_X61101225)m2,XarbpopuliCFBP3122_P12201453)m1;

Reconciliation:
XarbjuglandisCFBP2528_J52802696: Leaf Node
XarbfragariaeLMG19146_F14602844: Leaf Node
XarbfragariaeCFBP6762_F76200628: Leaf Node
m21 = LCA[XarbfragariaeLMG19146_F14602844, XarbfragariaeCFBP6762_F76200628]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbfragariaeCFBP6762
XarbzantedeschiaeCFBP7410_Z41000055: Leaf Node
XarbfragariaeCFBP6773_F77302414: Leaf Node
m24 = LCA[XarbzantedeschiaeCFBP7410_Z41000055, XarbfragariaeCFBP6773_F77302414]: Transfer, Mapping --> XarbzantedeschiaeCFBP7410, Recipient --> XarbfragariaeCFBP6773
m20 = LCA[XarbfragariaeLMG19146_F14602844, XarbfragariaeCFBP6773_F77302414]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbzantedeschiaeCFBP7410
XarbcelebensisNCPPB1832_C83201045: Leaf Node
m19 = LCA[XarbfragariaeLMG19146_F14602844, XarbcelebensisNCPPB1832_C83201045]: Speciation, Mapping --> 100
XarbarracaciaeCFBP7407_A40700243: Leaf Node
m18 = LCA[XarbfragariaeLMG19146_F14602844, XarbarracaciaeCFBP7407_A40700243]: Transfer, Mapping --> XarbarracaciaeCFBP7407, Recipient --> 100
XarbjuglandisCFBP7179_J17902205: Leaf Node
m17 = LCA[XarbfragariaeLMG19146_F14602844, XarbjuglandisCFBP7179_J17902205]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> XarbarracaciaeCFBP7407
m15 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisCFBP7179_J17902205]: Speciation, Mapping --> 100
XarbjuglandisCPBF1521_J52100892: Leaf Node
m14 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisCPBF1521_J52100892]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> 100
XarbjuglandisNCPPB1447_J44703855: Leaf Node
m13 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisNCPPB1447_J44703855]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbjuglandisNCPPB1447
XarbjuglandisCPBF427_J42701487: Leaf Node
m12 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisCPBF427_J42701487]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41702532: Leaf Node
m11 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisXaj417_J41702532]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisXaj417
XarbjuglandisDW3F3_J3F302926: Leaf Node
m10 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisDW3F3_J3F302926]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisDW3F3
XarbjuglandisJ303_J30303078: Leaf Node
m9 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisJ303_J30303078]: Speciation, Mapping --> 100
XarbjuglandisCFBP8253_J25300616: Leaf Node
m8 = LCA[XarbjuglandisCFBP2528_J52802696, XarbjuglandisCFBP8253_J25300616]: Speciation, Mapping --> 100
XarbpruniCFBP3894_P89400037: Leaf Node
XarbpruniIVIA26261_P26103347: Leaf Node
m38 = LCA[XarbpruniCFBP3894_P89400037, XarbpruniIVIA26261_P26103347]: Speciation, Mapping --> 100
XarbcorylinaCFBP1159_C15900141: Leaf Node
XarbcorylinaCFBP2565_C56501239: Leaf Node
m42 = LCA[XarbcorylinaCFBP1159_C15900141, XarbcorylinaCFBP2565_C56501239]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> XarbcorylinaCFBP1159
XarbcorylinaNCCB100457_C45702514: Leaf Node
m41 = LCA[XarbcorylinaCFBP1159_C15900141, XarbcorylinaNCCB100457_C45702514]: Speciation, Mapping --> 100
m37 = LCA[XarbpruniCFBP3894_P89400037, XarbcorylinaNCCB100457_C45702514]: Speciation, Mapping --> 100
m7 = LCA[XarbjuglandisCFBP2528_J52802696, XarbcorylinaNCCB100457_C45702514]: Speciation, Mapping --> 100
XarbguizotiaeCFBP7408_G40800359: Leaf Node
XarbguizotiaeCFBP7409_G40903590: Leaf Node
m46 = LCA[XarbguizotiaeCFBP7408_G40800359, XarbguizotiaeCFBP7409_G40903590]: Speciation, Mapping --> 100
m6 = LCA[XarbjuglandisCFBP2528_J52802696, XarbguizotiaeCFBP7409_G40903590]: Transfer, Mapping --> 100, Recipient --> 100
XarbcelebensisNCPPB1630_C63001507: Leaf Node
m5 = LCA[XarbjuglandisCFBP2528_J52802696, XarbcelebensisNCPPB1630_C63001507]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> 100
Xarb30043004_X00402048: Leaf Node
XarbfragariaeLMG19144_F14401315: Leaf Node
m51 = LCA[Xarb30043004_X00402048, XarbfragariaeLMG19144_F14401315]: Speciation, Mapping --> n2
XarbfragariaeLMG19145_F14501584: Leaf Node
m50 = LCA[Xarb30043004_X00402048, XarbfragariaeLMG19145_F14501584]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> n2
m4 = LCA[XarbjuglandisCFBP2528_J52802696, XarbfragariaeLMG19145_F14501584]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> XarbcelebensisNCPPB1630
XarbjuglandisCPBF367_J36701231: Leaf Node
XarbjuglandisCPBF426_J42601643: Leaf Node
m56 = LCA[XarbjuglandisCPBF367_J36701231, XarbjuglandisCPBF426_J42601643]: Speciation, Mapping --> 100
XarbpopuliCFBP3123_P12301953: Leaf Node
m55 = LCA[XarbjuglandisCPBF367_J36701231, XarbpopuliCFBP3123_P12301953]: Transfer, Mapping --> 100, Recipient --> XarbpopuliCFBP3123
m3 = LCA[XarbjuglandisCFBP2528_J52802696, XarbpopuliCFBP3123_P12301953]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeLMG19145
XgardineriSM40611_X61101225: Leaf Node
m2 = LCA[XarbjuglandisCFBP2528_J52802696, XgardineriSM40611_X61101225]: Speciation, Mapping --> 78
XarbpopuliCFBP3122_P12201453: Leaf Node
m1 = LCA[XarbjuglandisCFBP2528_J52802696, XarbpopuliCFBP3122_P12201453]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 54 (Duplications: 0, Transfers: 16, Losses: 6)
Total number of optimal solutions: 192
Total number of candidates for gene birth: 1