

 ------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
(((((((((((((((XarbpruniIVIA26261_P26101394,XarbpruniCFBP3894_P89401623)m15,((XarbfragariaeLMG19144_F14401873,XarbcelebensisNCPPB1832_C83203333)m19,XarbarracaciaeCFBP7407_A40702928)m18)m14,XarbjuglandisNCPPB1447_J44703845)m13,XarbcelebensisNCPPB1630_C63002271)m12,XarbcorylinaCFBP1159_C15900912)m11,XarbjuglandisDW3F3_J3F302146)m10,XarbcorylinaCFBP2565_C56503966)m9,((((((XarbjuglandisCPBF1521_J52100028,XarbjuglandisCPBF427_J42702507)m33,XarbjuglandisJ303_J30300266)m32,XarbjuglandisCFBP2528_J52801074)m31,XarbjuglandisXaj417_J41704030)m30,XarbfragariaeLMG19145_F14500003)m29,XarbcorylinaNCCB100457_C45700629)m28)m8,XarbzantedeschiaeCFBP7410_Z41003416)m7,XarbfragariaeCFBP6762_F76203105)m6,(Xarb30043004_X00402571,(XarbfragariaeLMG19146_F14600004,XarbfragariaeCFBP6773_F77300053)m45)m43)m5,XarbjuglandisCFBP7179_J17902812)m4,(XarbjuglandisCFBP8253_J25303752,XarbpopuliCFBP3122_P12203467)m49)m3,((XarbguizotiaeCFBP7408_G40803679,XarbguizotiaeCFBP7409_G40903426)m53,(XarbjuglandisCPBF426_J42600308,XarbjuglandisCPBF367_J36700004)m56)m52)m2,XarbpopuliCFBP3123_P12303943)m1;

Reconciliation:
XarbpruniIVIA26261_P26101394: Leaf Node
XarbpruniCFBP3894_P89401623: Leaf Node
m15 = LCA[XarbpruniIVIA26261_P26101394, XarbpruniCFBP3894_P89401623]: Speciation, Mapping --> 100
XarbfragariaeLMG19144_F14401873: Leaf Node
XarbcelebensisNCPPB1832_C83203333: Leaf Node
m19 = LCA[XarbfragariaeLMG19144_F14401873, XarbcelebensisNCPPB1832_C83203333]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeLMG19144
XarbarracaciaeCFBP7407_A40702928: Leaf Node
m18 = LCA[XarbfragariaeLMG19144_F14401873, XarbarracaciaeCFBP7407_A40702928]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbarracaciaeCFBP7407
m14 = LCA[XarbpruniIVIA26261_P26101394, XarbarracaciaeCFBP7407_A40702928]: Transfer, Mapping --> 100, Recipient --> 100
XarbjuglandisNCPPB1447_J44703845: Leaf Node
m13 = LCA[XarbpruniIVIA26261_P26101394, XarbjuglandisNCPPB1447_J44703845]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisNCPPB1447
XarbcelebensisNCPPB1630_C63002271: Leaf Node
m12 = LCA[XarbpruniIVIA26261_P26101394, XarbcelebensisNCPPB1630_C63002271]: Speciation, Mapping --> 100
XarbcorylinaCFBP1159_C15900912: Leaf Node
m11 = LCA[XarbpruniIVIA26261_P26101394, XarbcorylinaCFBP1159_C15900912]: Transfer, Mapping --> XarbcorylinaCFBP1159, Recipient --> 100
XarbjuglandisDW3F3_J3F302146: Leaf Node
m10 = LCA[XarbpruniIVIA26261_P26101394, XarbjuglandisDW3F3_J3F302146]: Transfer, Mapping --> XarbcorylinaCFBP1159, Recipient --> XarbjuglandisDW3F3
XarbcorylinaCFBP2565_C56503966: Leaf Node
m9 = LCA[XarbpruniIVIA26261_P26101394, XarbcorylinaCFBP2565_C56503966]: Speciation, Mapping --> 100
XarbjuglandisCPBF1521_J52100028: Leaf Node
XarbjuglandisCPBF427_J42702507: Leaf Node
m33 = LCA[XarbjuglandisCPBF1521_J52100028, XarbjuglandisCPBF427_J42702507]: Speciation, Mapping --> 100
XarbjuglandisJ303_J30300266: Leaf Node
m32 = LCA[XarbjuglandisCPBF1521_J52100028, XarbjuglandisJ303_J30300266]: Speciation, Mapping --> 100
XarbjuglandisCFBP2528_J52801074: Leaf Node
m31 = LCA[XarbjuglandisCPBF1521_J52100028, XarbjuglandisCFBP2528_J52801074]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisCFBP2528
XarbjuglandisXaj417_J41704030: Leaf Node
m30 = LCA[XarbjuglandisCPBF1521_J52100028, XarbjuglandisXaj417_J41704030]: Speciation, Mapping --> 100
XarbfragariaeLMG19145_F14500003: Leaf Node
m29 = LCA[XarbjuglandisCPBF1521_J52100028, XarbfragariaeLMG19145_F14500003]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeLMG19145
XarbcorylinaNCCB100457_C45700629: Leaf Node
m28 = LCA[XarbjuglandisCPBF1521_J52100028, XarbcorylinaNCCB100457_C45700629]: Transfer, Mapping --> 100, Recipient --> XarbcorylinaNCCB100457
m8 = LCA[XarbpruniIVIA26261_P26101394, XarbcorylinaNCCB100457_C45700629]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41003416: Leaf Node
m7 = LCA[XarbpruniIVIA26261_P26101394, XarbzantedeschiaeCFBP7410_Z41003416]: Transfer, Mapping --> 100, Recipient --> XarbzantedeschiaeCFBP7410
XarbfragariaeCFBP6762_F76203105: Leaf Node
m6 = LCA[XarbpruniIVIA26261_P26101394, XarbfragariaeCFBP6762_F76203105]: Speciation, Mapping --> 25
Xarb30043004_X00402571: Leaf Node
XarbfragariaeLMG19146_F14600004: Leaf Node
XarbfragariaeCFBP6773_F77300053: Leaf Node
m45 = LCA[XarbfragariaeLMG19146_F14600004, XarbfragariaeCFBP6773_F77300053]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> XarbfragariaeLMG19146
m43 = LCA[Xarb30043004_X00402571, XarbfragariaeCFBP6773_F77300053]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> Xarb30043004
m5 = LCA[XarbpruniIVIA26261_P26101394, XarbfragariaeCFBP6773_F77300053]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> 25
XarbjuglandisCFBP7179_J17902812: Leaf Node
m4 = LCA[XarbpruniIVIA26261_P26101394, XarbjuglandisCFBP7179_J17902812]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> XarbfragariaeCFBP6773
XarbjuglandisCFBP8253_J25303752: Leaf Node
XarbpopuliCFBP3122_P12203467: Leaf Node
m49 = LCA[XarbjuglandisCFBP8253_J25303752, XarbpopuliCFBP3122_P12203467]: Transfer, Mapping --> XarbpopuliCFBP3122, Recipient --> XarbjuglandisCFBP8253
m3 = LCA[XarbpruniIVIA26261_P26101394, XarbpopuliCFBP3122_P12203467]: Transfer, Mapping --> XarbpopuliCFBP3122, Recipient --> XarbjuglandisCFBP7179
XarbguizotiaeCFBP7408_G40803679: Leaf Node
XarbguizotiaeCFBP7409_G40903426: Leaf Node
m53 = LCA[XarbguizotiaeCFBP7408_G40803679, XarbguizotiaeCFBP7409_G40903426]: Speciation, Mapping --> 100
XarbjuglandisCPBF426_J42600308: Leaf Node
XarbjuglandisCPBF367_J36700004: Leaf Node
m56 = LCA[XarbjuglandisCPBF426_J42600308, XarbjuglandisCPBF367_J36700004]: Speciation, Mapping --> 100
m52 = LCA[XarbguizotiaeCFBP7408_G40803679, XarbjuglandisCPBF367_J36700004]: Transfer, Mapping --> 100, Recipient --> 100
m2 = LCA[XarbpruniIVIA26261_P26101394, XarbjuglandisCPBF367_J36700004]: Transfer, Mapping --> XarbpopuliCFBP3122, Recipient --> 100
XarbpopuliCFBP3123_P12303943: Leaf Node
m1 = LCA[XarbpruniIVIA26261_P26101394, XarbpopuliCFBP3123_P12303943]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 59 (Duplications: 0, Transfers: 18, Losses: 5)
Total number of optimal solutions: 240
Total number of candidates for gene birth: 1
