------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
(((((((((((((((XarbfragariaeCFBP6762_F76201729,XarbfragariaeLMG19146_F14601186)m15,XarbcelebensisNCPPB1630_C63000850)m14,(XarbjuglandisCFBP7179_J17903325,XarbcelebensisNCPPB1832_C83200385)m19)m13,XarbpruniCFBP3894_P89402980)m12,XarbcorylinaCFBP1159_C15900573)m11,XarbcorylinaNCCB100457_C45700654)m10,XarbpruniIVIA26261_P26102171)m9,XarbjuglandisCFBP2528_J52803147)m8,XarbjuglandisCPBF1521_J52103074)m7,XarbjuglandisNCPPB1447_J44700275)m6,XarbjuglandisCPBF427_J42702802)m5,XarbjuglandisXaj417_J41703193)m4,XarbjuglandisDW3F3_J3F302154)m3,(((((((XarbjuglandisCPBF426_J42600635,XarbjuglandisCPBF367_J36702707)m38,XgardineriSM40611_X61100436)m37,XarbpopuliCFBP3122_P12201178)m36,(XarbguizotiaeCFBP7409_G40902981,XarbguizotiaeCFBP7408_G40803387)m43)m35,(((XarbzantedeschiaeCFBP7410_Z41002188,XarbfragariaeCFBP6773_F77303379)m48,XarbfragariaeLMG19144_F14400570)m47,(XarbfragariaeLMG19145_F14503091,Xarb30043004_X00401136)m52)m46)m34,XarbcorylinaCFBP2565_C56500534)m33,XarbjuglandisCFBP8253_J25302490)m32)m2,XarbjuglandisJ303_J30300936)m1;

Reconciliation:
XarbfragariaeCFBP6762_F76201729: Leaf Node
XarbfragariaeLMG19146_F14601186: Leaf Node
m15 = LCA[XarbfragariaeCFBP6762_F76201729, XarbfragariaeLMG19146_F14601186]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbfragariaeCFBP6762
XarbcelebensisNCPPB1630_C63000850: Leaf Node
m14 = LCA[XarbfragariaeCFBP6762_F76201729, XarbcelebensisNCPPB1630_C63000850]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbcelebensisNCPPB1630
XarbjuglandisCFBP7179_J17903325: Leaf Node
XarbcelebensisNCPPB1832_C83200385: Leaf Node
m19 = LCA[XarbjuglandisCFBP7179_J17903325, XarbcelebensisNCPPB1832_C83200385]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbjuglandisCFBP7179
m13 = LCA[XarbfragariaeCFBP6762_F76201729, XarbcelebensisNCPPB1832_C83200385]: Speciation, Mapping --> 100
XarbpruniCFBP3894_P89402980: Leaf Node
m12 = LCA[XarbfragariaeCFBP6762_F76201729, XarbpruniCFBP3894_P89402980]: Transfer, Mapping --> 100, Recipient --> XarbpruniCFBP3894
XarbcorylinaCFBP1159_C15900573: Leaf Node
m11 = LCA[XarbfragariaeCFBP6762_F76201729, XarbcorylinaCFBP1159_C15900573]: Transfer, Mapping --> XarbcorylinaCFBP1159, Recipient --> 100
XarbcorylinaNCCB100457_C45700654: Leaf Node
m10 = LCA[XarbfragariaeCFBP6762_F76201729, XarbcorylinaNCCB100457_C45700654]: Speciation, Mapping --> 100
XarbpruniIVIA26261_P26102171: Leaf Node
m9 = LCA[XarbfragariaeCFBP6762_F76201729, XarbpruniIVIA26261_P26102171]: Speciation, Mapping --> 100
XarbjuglandisCFBP2528_J52803147: Leaf Node
m8 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisCFBP2528_J52803147]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> 100
XarbjuglandisCPBF1521_J52103074: Leaf Node
m7 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisCPBF1521_J52103074]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> XarbjuglandisCPBF1521
XarbjuglandisNCPPB1447_J44700275: Leaf Node
m6 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisNCPPB1447_J44700275]: Speciation, Mapping --> 100
XarbjuglandisCPBF427_J42702802: Leaf Node
m5 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisCPBF427_J42702802]: Transfer, Mapping --> XarbjuglandisCPBF427, Recipient --> 100
XarbjuglandisXaj417_J41703193: Leaf Node
m4 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisXaj417_J41703193]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> XarbjuglandisCPBF427
XarbjuglandisDW3F3_J3F302154: Leaf Node
m3 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisDW3F3_J3F302154]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> XarbjuglandisDW3F3
XarbjuglandisCPBF426_J42600635: Leaf Node
XarbjuglandisCPBF367_J36702707: Leaf Node
m38 = LCA[XarbjuglandisCPBF426_J42600635, XarbjuglandisCPBF367_J36702707]: Speciation, Mapping --> 100
XgardineriSM40611_X61100436: Leaf Node
m37 = LCA[XarbjuglandisCPBF426_J42600635, XgardineriSM40611_X61100436]: Speciation, Mapping --> 78
XarbpopuliCFBP3122_P12201178: Leaf Node
m36 = LCA[XarbjuglandisCPBF426_J42600635, XarbpopuliCFBP3122_P12201178]: Speciation, Mapping --> 100
XarbguizotiaeCFBP7409_G40902981: Leaf Node
XarbguizotiaeCFBP7408_G40803387: Leaf Node
m43 = LCA[XarbguizotiaeCFBP7409_G40902981, XarbguizotiaeCFBP7408_G40803387]: Speciation, Mapping --> 100
m35 = LCA[XarbjuglandisCPBF426_J42600635, XarbguizotiaeCFBP7408_G40803387]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41002188: Leaf Node
XarbfragariaeCFBP6773_F77303379: Leaf Node
m48 = LCA[XarbzantedeschiaeCFBP7410_Z41002188, XarbfragariaeCFBP6773_F77303379]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> XarbzantedeschiaeCFBP7410
XarbfragariaeLMG19144_F14400570: Leaf Node
m47 = LCA[XarbzantedeschiaeCFBP7410_Z41002188, XarbfragariaeLMG19144_F14400570]: Speciation, Mapping --> 100
XarbfragariaeLMG19145_F14503091: Leaf Node
Xarb30043004_X00401136: Leaf Node
m52 = LCA[XarbfragariaeLMG19145_F14503091, Xarb30043004_X00401136]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> Xarb30043004
m46 = LCA[XarbzantedeschiaeCFBP7410_Z41002188, Xarb30043004_X00401136]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 100
m34 = LCA[XarbjuglandisCPBF426_J42600635, Xarb30043004_X00401136]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 100
XarbcorylinaCFBP2565_C56500534: Leaf Node
m33 = LCA[XarbjuglandisCPBF426_J42600635, XarbcorylinaCFBP2565_C56500534]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> XarbcorylinaCFBP2565
XarbjuglandisCFBP8253_J25302490: Leaf Node
m32 = LCA[XarbjuglandisCPBF426_J42600635, XarbjuglandisCFBP8253_J25302490]: Transfer, Mapping --> XarbjuglandisCFBP8253, Recipient --> XarbfragariaeLMG19145
m2 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisCFBP8253_J25302490]: Speciation, Mapping --> 98
XarbjuglandisJ303_J30300936: Leaf Node
m1 = LCA[XarbfragariaeCFBP6762_F76201729, XarbjuglandisJ303_J30300936]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 53 (Duplications: 0, Transfers: 16, Losses: 5)
Total number of optimal solutions: 128
Total number of candidates for gene birth: 1