------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
((XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100,(Xarb30043004,XarbfragariaeLMG19145)n2)n1;

Gene Tree: 
((((((((((((((((XarbjuglandisCFBP8253_J25303426,XarbjuglandisCFBP2528_J52802470)m16,XarbjuglandisCPBF1521_J52101332)m15,XarbjuglandisJ303_J30302632)m14,XarbjuglandisCPBF427_J42700554)m13,XarbjuglandisXaj417_J41701110)m12,((XarbpruniCFBP3894_P89400749,XarbpruniIVIA26261_P26100471)m24,XarbcorylinaCFBP1159_C15901794)m23)m11,(XarbjuglandisNCPPB1447_J44702989,XarbcorylinaCFBP2565_C56500001)m28)m10,XarbcorylinaNCCB100457_C45704084)m9,((XarbzantedeschiaeCFBP7410_Z41002687,XarbfragariaeCFBP6762_F76202542)m33,XarbfragariaeLMG19145_F14500618)m32)m8,XarbcelebensisNCPPB1630_C63004006)m7,(XarbjuglandisDW3F3_J3F302706,XarbjuglandisCFBP7179_J17902004)m38)m6,((XarbguizotiaeCFBP7408_G40801568,XarbguizotiaeCFBP7409_G40902356)m42,XarbfragariaeLMG19146_F14602630)m41)m5,(Xarb30043004_X00401292,XarbfragariaeLMG19144_F14403776)m46)m4,XarbcelebensisNCPPB1832_C83202735)m3,((XarbjuglandisCPBF367_J36702316,(XarbcelebensisNCPPB1630_C63000786,XarbfragariaeLMG19145_F14503112)m53)m51,XarbarracaciaeCFBP7407_A40703525)m50)m2,XarbfragariaeCFBP6773_F77302031)m1;

Reconciliation:
XarbjuglandisCFBP8253_J25303426: Leaf Node
XarbjuglandisCFBP2528_J52802470: Leaf Node
m16 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisCFBP2528_J52802470]: Transfer, Mapping --> XarbjuglandisCFBP8253, Recipient --> XarbjuglandisCFBP2528
XarbjuglandisCPBF1521_J52101332: Leaf Node
m15 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisCPBF1521_J52101332]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbjuglandisCFBP8253
XarbjuglandisJ303_J30302632: Leaf Node
m14 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisJ303_J30302632]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbjuglandisJ303
XarbjuglandisCPBF427_J42700554: Leaf Node
m13 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisCPBF427_J42700554]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41701110: Leaf Node
m12 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisXaj417_J41701110]: Speciation, Mapping --> 100
XarbpruniCFBP3894_P89400749: Leaf Node
XarbpruniIVIA26261_P26100471: Leaf Node
m24 = LCA[XarbpruniCFBP3894_P89400749, XarbpruniIVIA26261_P26100471]: Speciation, Mapping --> 100
XarbcorylinaCFBP1159_C15901794: Leaf Node
m23 = LCA[XarbpruniCFBP3894_P89400749, XarbcorylinaCFBP1159_C15901794]: Speciation, Mapping --> 100
m11 = LCA[XarbjuglandisCFBP8253_J25303426, XarbcorylinaCFBP1159_C15901794]: Transfer, Mapping --> 100, Recipient --> 100
XarbjuglandisNCPPB1447_J44702989: Leaf Node
XarbcorylinaCFBP2565_C56500001: Leaf Node
m28 = LCA[XarbjuglandisNCPPB1447_J44702989, XarbcorylinaCFBP2565_C56500001]: Transfer, Mapping --> XarbjuglandisNCPPB1447, Recipient --> XarbcorylinaCFBP2565
m10 = LCA[XarbjuglandisCFBP8253_J25303426, XarbcorylinaCFBP2565_C56500001]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisNCPPB1447
XarbcorylinaNCCB100457_C45704084: Leaf Node
m9 = LCA[XarbjuglandisCFBP8253_J25303426, XarbcorylinaNCCB100457_C45704084]: Transfer, Mapping --> 100, Recipient --> XarbcorylinaNCCB100457
XarbzantedeschiaeCFBP7410_Z41002687: Leaf Node
XarbfragariaeCFBP6762_F76202542: Leaf Node
m33 = LCA[XarbzantedeschiaeCFBP7410_Z41002687, XarbfragariaeCFBP6762_F76202542]: Speciation, Mapping --> 25
XarbfragariaeLMG19145_F14500618: Leaf Node
m32 = LCA[XarbzantedeschiaeCFBP7410_Z41002687, XarbfragariaeLMG19145_F14500618]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 25
m8 = LCA[XarbjuglandisCFBP8253_J25303426, XarbfragariaeLMG19145_F14500618]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeLMG19145
XarbcelebensisNCPPB1630_C63004006: Leaf Node
m7 = LCA[XarbjuglandisCFBP8253_J25303426, XarbcelebensisNCPPB1630_C63004006]: Transfer, Mapping --> 100, Recipient --> XarbcelebensisNCPPB1630
XarbjuglandisDW3F3_J3F302706: Leaf Node
XarbjuglandisCFBP7179_J17902004: Leaf Node
m38 = LCA[XarbjuglandisDW3F3_J3F302706, XarbjuglandisCFBP7179_J17902004]: Speciation, Mapping --> 100
m6 = LCA[XarbjuglandisCFBP8253_J25303426, XarbjuglandisCFBP7179_J17902004]: Speciation, Mapping --> 100
XarbguizotiaeCFBP7408_G40801568: Leaf Node
XarbguizotiaeCFBP7409_G40902356: Leaf Node
m42 = LCA[XarbguizotiaeCFBP7408_G40801568, XarbguizotiaeCFBP7409_G40902356]: Speciation, Mapping --> 100
XarbfragariaeLMG19146_F14602630: Leaf Node
m41 = LCA[XarbguizotiaeCFBP7408_G40801568, XarbfragariaeLMG19146_F14602630]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> 100
m5 = LCA[XarbjuglandisCFBP8253_J25303426, XarbfragariaeLMG19146_F14602630]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> 100
Xarb30043004_X00401292: Leaf Node
XarbfragariaeLMG19144_F14403776: Leaf Node
m46 = LCA[Xarb30043004_X00401292, XarbfragariaeLMG19144_F14403776]: Transfer, Mapping --> Xarb30043004, Recipient --> XarbfragariaeLMG19144
m4 = LCA[XarbjuglandisCFBP8253_J25303426, XarbfragariaeLMG19144_F14403776]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> Xarb30043004
XarbcelebensisNCPPB1832_C83202735: Leaf Node
m3 = LCA[XarbjuglandisCFBP8253_J25303426, XarbcelebensisNCPPB1832_C83202735]: Speciation, Mapping --> 100
XarbjuglandisCPBF367_J36702316: Leaf Node
XarbcelebensisNCPPB1630_C63000786: Leaf Node
XarbfragariaeLMG19145_F14503112: Leaf Node
m53 = LCA[XarbcelebensisNCPPB1630_C63000786, XarbfragariaeLMG19145_F14503112]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbfragariaeLMG19145
m51 = LCA[XarbjuglandisCPBF367_J36702316, XarbfragariaeLMG19145_F14503112]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbjuglandisCPBF367
XarbarracaciaeCFBP7407_A40703525: Leaf Node
m50 = LCA[XarbjuglandisCPBF367_J36702316, XarbarracaciaeCFBP7407_A40703525]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbarracaciaeCFBP7407
m2 = LCA[XarbjuglandisCFBP8253_J25303426, XarbarracaciaeCFBP7407_A40703525]: Speciation, Mapping --> 100
XarbfragariaeCFBP6773_F77302031: Leaf Node
m1 = LCA[XarbjuglandisCFBP8253_J25303426, XarbfragariaeCFBP6773_F77302031]: Speciation, Mapping --> 56

The minimum reconciliation cost is: 59 (Duplications: 0, Transfers: 17, Losses: 8)
Total number of optimal solutions: 204
Total number of candidates for gene birth: 1