------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
((XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100,(Xarb30043004,XarbfragariaeLMG19145)n2)n1;

Gene Tree: 
((((((((((((((((XarbjuglandisCPBF426_J42601004,XarbjuglandisCPBF367_J36700206)m16,XarbzantedeschiaeCFBP7410_Z41003509)m15,XarbpruniCFBP3894_P89401709)m14,XarbjuglandisCFBP2528_J52801185)m13,XarbjuglandisNCPPB1447_J44700948)m12,XarbjuglandisXaj417_J41703914)m11,XarbjuglandisJ303_J30303515)m10,XarbjuglandisCFBP7179_J17902691)m9,XarbfragariaeCFBP6762_F76202851)m8,XarbfragariaeLMG19144_F14400229)m7,XarbcelebensisNCPPB1630_C63000586)m6,XarbcorylinaNCCB100457_C45700352)m5,XarbarracaciaeCFBP7407_A40704006)m4,((XarbguizotiaeCFBP7409_G40902545,XarbguizotiaeCFBP7408_G40803204)m32,(XarbfragariaeLMG19146_F14603194,(((((XarbfragariaeCFBP6773_F77302195,(((XarbjuglandisCPBF427_J42700611,(((XgardineriSM40611_X61100959,Xarb30043004_X00401944)m49,XarbpruniIVIA26261_P26102630)m48,XarbjuglandisCPBF1521_J52100779)m47)m45,XarbjuglandisDW3F3_J3F302032)m44,XarbjuglandisCFBP8253_J25302628)m43)m41,XarbfragariaeLMG19145_F14501996)m40,XarbcelebensisNCPPB1832_C83203239)m39,XarbcorylinaCFBP2565_C56503626)m38,XarbcorylinaCFBP1159_C15901006)m37)m35)m31)m3,XarbpopuliCFBP3122_P12203417)m2,XarbpopuliCFBP3123_P12303488)m1;

Reconciliation:
XarbjuglandisCPBF426_J42601004: Leaf Node
XarbjuglandisCPBF367_J36700206: Leaf Node
m16 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisCPBF367_J36700206]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41003509: Leaf Node
m15 = LCA[XarbjuglandisCPBF426_J42601004, XarbzantedeschiaeCFBP7410_Z41003509]: Transfer, Mapping --> 100, Recipient --> XarbzantedeschiaeCFBP7410
XarbpruniCFBP3894_P89401709: Leaf Node
m14 = LCA[XarbjuglandisCPBF426_J42601004, XarbpruniCFBP3894_P89401709]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> 100
XarbjuglandisCFBP2528_J52801185: Leaf Node
m13 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisCFBP2528_J52801185]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> XarbpruniCFBP3894
XarbjuglandisNCPPB1447_J44700948: Leaf Node
m12 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisNCPPB1447_J44700948]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41703914: Leaf Node
m11 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisXaj417_J41703914]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> 100
XarbjuglandisJ303_J30303515: Leaf Node
m10 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisJ303_J30303515]: Speciation, Mapping --> 100
XarbjuglandisCFBP7179_J17902691: Leaf Node
m9 = LCA[XarbjuglandisCPBF426_J42601004, XarbjuglandisCFBP7179_J17902691]: Speciation, Mapping --> 100
XarbfragariaeCFBP6762_F76202851: Leaf Node
m8 = LCA[XarbjuglandisCPBF426_J42601004, XarbfragariaeCFBP6762_F76202851]: Speciation, Mapping --> 25
XarbfragariaeLMG19144_F14400229: Leaf Node
m7 = LCA[XarbjuglandisCPBF426_J42601004, XarbfragariaeLMG19144_F14400229]: Transfer, Mapping --> 25, Recipient --> XarbfragariaeLMG19144
XarbcelebensisNCPPB1630_C63000586: Leaf Node
m6 = LCA[XarbjuglandisCPBF426_J42601004, XarbcelebensisNCPPB1630_C63000586]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> 25
XarbcorylinaNCCB100457_C45700352: Leaf Node
m5 = LCA[XarbjuglandisCPBF426_J42601004, XarbcorylinaNCCB100457_C45700352]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbcorylinaNCCB100457
XarbarracaciaeCFBP7407_A40704006: Leaf Node
m4 = LCA[XarbjuglandisCPBF426_J42601004, XarbarracaciaeCFBP7407_A40704006]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbarracaciaeCFBP7407
XarbguizotiaeCFBP7409_G40902545: Leaf Node
XarbguizotiaeCFBP7408_G40803204: Leaf Node
m32 = LCA[XarbguizotiaeCFBP7409_G40902545, XarbguizotiaeCFBP7408_G40803204]: Speciation, Mapping --> 100
XarbfragariaeLMG19146_F14603194: Leaf Node
XarbfragariaeCFBP6773_F77302195: Leaf Node
XarbjuglandisCPBF427_J42700611: Leaf Node
XgardineriSM40611_X61100959: Leaf Node
Xarb30043004_X00401944: Leaf Node
m49 = LCA[XgardineriSM40611_X61100959, Xarb30043004_X00401944]: Transfer, Mapping --> XgardineriSM40611, Recipient --> Xarb30043004
XarbpruniIVIA26261_P26102630: Leaf Node
m48 = LCA[XgardineriSM40611_X61100959, XarbpruniIVIA26261_P26102630]: Transfer, Mapping --> XgardineriSM40611, Recipient --> XarbpruniIVIA26261
XarbjuglandisCPBF1521_J52100779: Leaf Node
m47 = LCA[XgardineriSM40611_X61100959, XarbjuglandisCPBF1521_J52100779]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XgardineriSM40611
m45 = LCA[XarbjuglandisCPBF427_J42700611, XarbjuglandisCPBF1521_J52100779]: Speciation, Mapping --> 100
XarbjuglandisDW3F3_J3F302032: Leaf Node
m44 = LCA[XarbjuglandisCPBF427_J42700611, XarbjuglandisDW3F3_J3F302032]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisDW3F3
XarbjuglandisCFBP8253_J25302628: Leaf Node
m43 = LCA[XarbjuglandisCPBF427_J42700611, XarbjuglandisCFBP8253_J25302628]: Speciation, Mapping --> 100
m41 = LCA[XarbfragariaeCFBP6773_F77302195, XarbjuglandisCFBP8253_J25302628]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> 100
XarbfragariaeLMG19145_F14501996: Leaf Node
m40 = LCA[XarbfragariaeCFBP6773_F77302195, XarbfragariaeLMG19145_F14501996]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> XarbfragariaeLMG19145
XarbcelebensisNCPPB1832_C83203239: Leaf Node
m39 = LCA[XarbfragariaeCFBP6773_F77302195, XarbcelebensisNCPPB1832_C83203239]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeCFBP6773
XarbcorylinaCFBP2565_C56503626: Leaf Node
m38 = LCA[XarbfragariaeCFBP6773_F77302195, XarbcorylinaCFBP2565_C56503626]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbcorylinaCFBP2565
XarbcorylinaCFBP1159_C15901006: Leaf Node
m37 = LCA[XarbfragariaeCFBP6773_F77302195, XarbcorylinaCFBP1159_C15901006]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbcorylinaCFBP1159
m35 = LCA[XarbfragariaeLMG19146_F14603194, XarbcorylinaCFBP1159_C15901006]: Speciation, Mapping --> 100
m31 = LCA[XarbguizotiaeCFBP7409_G40902545, XarbcorylinaCFBP1159_C15901006]: Transfer, Mapping --> 100, Recipient --> 100
m3 = LCA[XarbjuglandisCPBF426_J42601004, XarbcorylinaCFBP1159_C15901006]: Speciation, Mapping --> 100
XarbpopuliCFBP3122_P12203417: Leaf Node
m2 = LCA[XarbjuglandisCPBF426_J42601004, XarbpopuliCFBP3122_P12203417]: Transfer, Mapping --> XarbpopuliCFBP3122, Recipient --> 100
XarbpopuliCFBP3123_P12303488: Leaf Node
m1 = LCA[XarbjuglandisCPBF426_J42601004, XarbpopuliCFBP3123_P12303488]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 64 (Duplications: 0, Transfers: 19, Losses: 7)
Total number of optimal solutions: 512
Total number of candidates for gene birth: 1