------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
((XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100,(Xarb30043004,XarbfragariaeLMG19145)n2)n1;

Gene Tree: 
((((((((((((((((XarbguizotiaeCFBP7408_G40802075,XarbguizotiaeCFBP7409_G40903780)m16,XarbfragariaeLMG19146_F14601979)m15,XarbfragariaeLMG19144_F14403490)m14,XarbcelebensisNCPPB1832_C83202843)m13,(((((((XarbjuglandisCPBF367_J36700533,XarbjuglandisCPBF426_J42603344)m28,XgardineriSM40611_X61101648)m27,XarbpopuliCFBP3123_P12302409)m26,XarbpopuliCFBP3122_P12202061)m25,XarbfragariaeLMG19145_F14502345)m24,XarbcelebensisNCPPB1630_C63000224)m23,XarbarracaciaeCFBP7407_A40703964)m22)m12,XarbzantedeschiaeCFBP7410_Z41001224)m11,(Xarb30043004_X00401560,XarbfragariaeCFBP6773_F77301152)m38)m10,XarbfragariaeCFBP6762_F76202661)m9,XarbpruniIVIA26261_P26102373)m8,XarbjuglandisCPBF1521_J52101326)m7,XarbjuglandisCPBF427_J42702036)m6,XarbjuglandisJ303_J30302418)m5,XarbjuglandisCFBP7179_J17900717)m4,XarbcorylinaCFBP2565_C56504277)m3,(((((XarbcorylinaCFBP1159_C15904021,XarbjuglandisDW3F3_J3F301658)m52,(XarbpruniCFBP3894_P89403057,XarbcorylinaNCCB100457_C45702241)m55)m51,XarbjuglandisCFBP2528_J52801553)m50,XarbjuglandisNCPPB1447_J44703647)m49,XarbjuglandisXaj417_J41703558)m48)m2,XarbjuglandisCFBP8253_J25302660)m1;

Reconciliation:
XarbguizotiaeCFBP7408_G40802075: Leaf Node
XarbguizotiaeCFBP7409_G40903780: Leaf Node
m16 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbguizotiaeCFBP7409_G40903780]: Speciation, Mapping --> 100
XarbfragariaeLMG19146_F14601979: Leaf Node
m15 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbfragariaeLMG19146_F14601979]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> 100
XarbfragariaeLMG19144_F14403490: Leaf Node
m14 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbfragariaeLMG19144_F14403490]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbfragariaeLMG19144
XarbcelebensisNCPPB1832_C83202843: Leaf Node
m13 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbcelebensisNCPPB1832_C83202843]: Speciation, Mapping --> 100
XarbjuglandisCPBF367_J36700533: Leaf Node
XarbjuglandisCPBF426_J42603344: Leaf Node
m28 = LCA[XarbjuglandisCPBF367_J36700533, XarbjuglandisCPBF426_J42603344]: Speciation, Mapping --> 100
XgardineriSM40611_X61101648: Leaf Node
m27 = LCA[XarbjuglandisCPBF367_J36700533, XgardineriSM40611_X61101648]: Speciation, Mapping --> 78
XarbpopuliCFBP3123_P12302409: Leaf Node
m26 = LCA[XarbjuglandisCPBF367_J36700533, XarbpopuliCFBP3123_P12302409]: Transfer, Mapping --> XarbpopuliCFBP3123, Recipient --> 78
XarbpopuliCFBP3122_P12202061: Leaf Node
m25 = LCA[XarbjuglandisCPBF367_J36700533, XarbpopuliCFBP3122_P12202061]: Speciation, Mapping --> 100
XarbfragariaeLMG19145_F14502345: Leaf Node
m24 = LCA[XarbjuglandisCPBF367_J36700533, XarbfragariaeLMG19145_F14502345]: Transfer, Mapping --> 100, Recipient --> XarbfragariaeLMG19145
XarbcelebensisNCPPB1630_C63000224: Leaf Node
m23 = LCA[XarbjuglandisCPBF367_J36700533, XarbcelebensisNCPPB1630_C63000224]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> 100
XarbarracaciaeCFBP7407_A40703964: Leaf Node
m22 = LCA[XarbjuglandisCPBF367_J36700533, XarbarracaciaeCFBP7407_A40703964]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> XarbarracaciaeCFBP7407
m12 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbarracaciaeCFBP7407_A40703964]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41001224: Leaf Node
m11 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbzantedeschiaeCFBP7410_Z41001224]: Speciation, Mapping --> 25
Xarb30043004_X00401560: Leaf Node
XarbfragariaeCFBP6773_F77301152: Leaf Node
m38 = LCA[Xarb30043004_X00401560, XarbfragariaeCFBP6773_F77301152]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> Xarb30043004
m10 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbfragariaeCFBP6773_F77301152]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> 25
XarbfragariaeCFBP6762_F76202661: Leaf Node
m9 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbfragariaeCFBP6762_F76202661]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> XarbfragariaeCFBP6762
XarbpruniIVIA26261_P26102373: Leaf Node
m8 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbpruniIVIA26261_P26102373]: Transfer, Mapping --> XarbpruniIVIA26261, Recipient --> XarbfragariaeCFBP6773
XarbjuglandisCPBF1521_J52101326: Leaf Node
m7 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisCPBF1521_J52101326]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbpruniIVIA26261
XarbjuglandisCPBF427_J42702036: Leaf Node
m6 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisCPBF427_J42702036]: Speciation, Mapping --> 100
XarbjuglandisJ303_J30302418: Leaf Node
m5 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisJ303_J30302418]: Speciation, Mapping --> 100
XarbjuglandisCFBP7179_J17900717: Leaf Node
m4 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisCFBP7179_J17900717]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> 100
XarbcorylinaCFBP2565_C56504277: Leaf Node
m3 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbcorylinaCFBP2565_C56504277]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> XarbcorylinaCFBP2565
XarbcorylinaCFBP1159_C15904021: Leaf Node
XarbjuglandisDW3F3_J3F301658: Leaf Node
m52 = LCA[XarbcorylinaCFBP1159_C15904021, XarbjuglandisDW3F3_J3F301658]: Transfer, Mapping --> XarbcorylinaCFBP1159, Recipient --> XarbjuglandisDW3F3
XarbpruniCFBP3894_P89403057: Leaf Node
XarbcorylinaNCCB100457_C45702241: Leaf Node
m55 = LCA[XarbpruniCFBP3894_P89403057, XarbcorylinaNCCB100457_C45702241]: Transfer, Mapping --> XarbcorylinaNCCB100457, Recipient --> XarbpruniCFBP3894
m51 = LCA[XarbcorylinaCFBP1159_C15904021, XarbcorylinaNCCB100457_C45702241]: Speciation, Mapping --> 100
XarbjuglandisCFBP2528_J52801553: Leaf Node
m50 = LCA[XarbcorylinaCFBP1159_C15904021, XarbjuglandisCFBP2528_J52801553]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> 100
XarbjuglandisNCPPB1447_J44703647: Leaf Node
m49 = LCA[XarbcorylinaCFBP1159_C15904021, XarbjuglandisNCPPB1447_J44703647]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41703558: Leaf Node
m48 = LCA[XarbcorylinaCFBP1159_C15904021, XarbjuglandisXaj417_J41703558]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisXaj417
m2 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisXaj417_J41703558]: Speciation, Mapping --> 100
XarbjuglandisCFBP8253_J25302660: Leaf Node
m1 = LCA[XarbguizotiaeCFBP7408_G40802075, XarbjuglandisCFBP8253_J25302660]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisCFBP8253

The minimum reconciliation cost is: 57 (Duplications: 0, Transfers: 18, Losses: 3)
Total number of optimal solutions: 256
Total number of candidates for gene birth: 4