------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
((((((((((((((((((((XarbfragariaeCFBP6773_F77301090,((((XarbjuglandisCPBF427_J42700689,((XarbpruniIVIA26261_P26101454,((XarbfragariaeLMG19144_F14403887,XarbfragariaeCFBP6762_F76202090)m31,Xarb30043004_X00402315)m30)m28,XarbjuglandisCPBF1521_J52101968)m27)m25,XarbjuglandisXaj417_J41701475)m24,XarbjuglandisCPBF367_J36701910)m23,XarbjuglandisCFBP8253_J25300739)m22)m20,XarbfragariaeLMG19145_F14501295)m19,XarbcorylinaCFBP2565_C56500354)m18,XarbcorylinaCFBP1159_C15901147)m17,XarbarracaciaeCFBP7407_A40703659)m16,XarbcorylinaNCCB100457_C45703726)m15,XarbcelebensisNCPPB1630_C63003658)m14,XarbfragariaeLMG19146_F14600692)m13,XarbjuglandisCFBP7179_J17900285)m12,XarbjuglandisJ303_J30301663)m11,XarbjuglandisDW3F3_J3F301222)m10,XarbjuglandisCPBF426_J42603750)m9,XarbjuglandisNCPPB1447_J44701658)m8,XarbjuglandisCFBP2528_J52801978)m7,XarbpruniCFBP3894_P89401255)m6,XarbzantedeschiaeCFBP7410_Z41004086)m5,((XarbpopuliCFBP3123_P12301054,XarbpopuliCFBP3122_P12203847)m55,XgardineriSM40611_X61101869)m54)m4,XarbcelebensisNCPPB1832_C83202759)m3,XarbguizotiaeCFBP7409_G40901377)m2,XarbguizotiaeCFBP7408_G40802241)m1;

Reconciliation:
XarbfragariaeCFBP6773_F77301090: Leaf Node
XarbjuglandisCPBF427_J42700689: Leaf Node
XarbpruniIVIA26261_P26101454: Leaf Node
XarbfragariaeLMG19144_F14403887: Leaf Node
XarbfragariaeCFBP6762_F76202090: Leaf Node
m31 = LCA[XarbfragariaeLMG19144_F14403887, XarbfragariaeCFBP6762_F76202090]: Transfer, Mapping --> XarbfragariaeLMG19144, Recipient --> XarbfragariaeCFBP6762
Xarb30043004_X00402315: Leaf Node
m30 = LCA[XarbfragariaeLMG19144_F14403887, Xarb30043004_X00402315]: Transfer, Mapping --> XarbfragariaeLMG19144, Recipient --> Xarb30043004
m28 = LCA[XarbpruniIVIA26261_P26101454, Xarb30043004_X00402315]: Transfer, Mapping --> XarbpruniIVIA26261, Recipient --> XarbfragariaeLMG19144
XarbjuglandisCPBF1521_J52101968: Leaf Node
m27 = LCA[XarbpruniIVIA26261_P26101454, XarbjuglandisCPBF1521_J52101968]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbpruniIVIA26261
m25 = LCA[XarbjuglandisCPBF427_J42700689, XarbjuglandisCPBF1521_J52101968]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41701475: Leaf Node
m24 = LCA[XarbjuglandisCPBF427_J42700689, XarbjuglandisXaj417_J41701475]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> 100
XarbjuglandisCPBF367_J36701910: Leaf Node
m23 = LCA[XarbjuglandisCPBF427_J42700689, XarbjuglandisCPBF367_J36701910]: Transfer, Mapping --> XarbjuglandisXaj417, Recipient --> XarbjuglandisCPBF367
XarbjuglandisCFBP8253_J25300739: Leaf Node
m22 = LCA[XarbjuglandisCPBF427_J42700689, XarbjuglandisCFBP8253_J25300739]: Speciation, Mapping --> 98
m20 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisCFBP8253_J25300739]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> 98
XarbfragariaeLMG19145_F14501295: Leaf Node
m19 = LCA[XarbfragariaeCFBP6773_F77301090, XarbfragariaeLMG19145_F14501295]: Transfer, Mapping --> XarbfragariaeCFBP6773, Recipient --> XarbfragariaeLMG19145
XarbcorylinaCFBP2565_C56500354: Leaf Node
m18 = LCA[XarbfragariaeCFBP6773_F77301090, XarbcorylinaCFBP2565_C56500354]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> XarbfragariaeCFBP6773
XarbcorylinaCFBP1159_C15901147: Leaf Node
m17 = LCA[XarbfragariaeCFBP6773_F77301090, XarbcorylinaCFBP1159_C15901147]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> XarbcorylinaCFBP1159
XarbarracaciaeCFBP7407_A40703659: Leaf Node
m16 = LCA[XarbfragariaeCFBP6773_F77301090, XarbarracaciaeCFBP7407_A40703659]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> XarbarracaciaeCFBP7407
XarbcorylinaNCCB100457_C45703726: Leaf Node
m15 = LCA[XarbfragariaeCFBP6773_F77301090, XarbcorylinaNCCB100457_C45703726]: Speciation, Mapping --> 100
XarbcelebensisNCPPB1630_C63003658: Leaf Node
m14 = LCA[XarbfragariaeCFBP6773_F77301090, XarbcelebensisNCPPB1630_C63003658]: Transfer, Mapping --> XarbcelebensisNCPPB1630, Recipient --> 100
XarbfragariaeLMG19146_F14600692: Leaf Node
m13 = LCA[XarbfragariaeCFBP6773_F77301090, XarbfragariaeLMG19146_F14600692]: Speciation, Mapping --> 100
XarbjuglandisCFBP7179_J17900285: Leaf Node
m12 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisCFBP7179_J17900285]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> 100
XarbjuglandisJ303_J30301663: Leaf Node
m11 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisJ303_J30301663]: Transfer, Mapping --> XarbjuglandisCFBP7179, Recipient --> XarbjuglandisJ303
XarbjuglandisDW3F3_J3F301222: Leaf Node
m10 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisDW3F3_J3F301222]: Speciation, Mapping --> 100
XarbjuglandisCPBF426_J42603750: Leaf Node
m9 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisCPBF426_J42603750]: Transfer, Mapping --> XarbjuglandisCPBF426, Recipient --> 100
XarbjuglandisNCPPB1447_J44701658: Leaf Node
m8 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisNCPPB1447_J44701658]: Transfer, Mapping --> XarbjuglandisNCPPB1447, Recipient --> XarbjuglandisCPBF426
XarbjuglandisCFBP2528_J52801978: Leaf Node
m7 = LCA[XarbfragariaeCFBP6773_F77301090, XarbjuglandisCFBP2528_J52801978]: Speciation, Mapping --> 100
XarbpruniCFBP3894_P89401255: Leaf Node
m6 = LCA[XarbfragariaeCFBP6773_F77301090, XarbpruniCFBP3894_P89401255]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> 100
XarbzantedeschiaeCFBP7410_Z41004086: Leaf Node
m5 = LCA[XarbfragariaeCFBP6773_F77301090, XarbzantedeschiaeCFBP7410_Z41004086]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> XarbzantedeschiaeCFBP7410
XarbpopuliCFBP3123_P12301054: Leaf Node
XarbpopuliCFBP3122_P12203847: Leaf Node
m55 = LCA[XarbpopuliCFBP3123_P12301054, XarbpopuliCFBP3122_P12203847]: Speciation, Mapping --> 100
XgardineriSM40611_X61101869: Leaf Node
m54 = LCA[XarbpopuliCFBP3123_P12301054, XgardineriSM40611_X61101869]: Speciation, Mapping --> 100
m4 = LCA[XarbfragariaeCFBP6773_F77301090, XgardineriSM40611_X61101869]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> 100
XarbcelebensisNCPPB1832_C83202759: Leaf Node
m3 = LCA[XarbfragariaeCFBP6773_F77301090, XarbcelebensisNCPPB1832_C83202759]: Transfer, Mapping --> XarbpruniCFBP3894, Recipient --> XarbcelebensisNCPPB1832
XarbguizotiaeCFBP7409_G40901377: Leaf Node
m2 = LCA[XarbfragariaeCFBP6773_F77301090, XarbguizotiaeCFBP7409_G40901377]: Transfer, Mapping --> XarbguizotiaeCFBP7409, Recipient --> XarbpruniCFBP3894
XarbguizotiaeCFBP7408_G40802241: Leaf Node
m1 = LCA[XarbfragariaeCFBP6773_F77301090, XarbguizotiaeCFBP7408_G40802241]: Speciation, Mapping --> 100

The minimum reconciliation cost is: 66 (Duplications: 0, Transfers: 21, Losses: 3)
Total number of optimal solutions: 1632
Total number of candidates for gene birth: 1