------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
(((((((((((((((XarbpruniIVIA26261_P26100324,XarbpruniCFBP3894_P89400189)m15,((XarbguizotiaeCFBP7409_G40902678,XarbguizotiaeCFBP7408_G40802512)m19,XgardineriSM40611_X61102614)m18)m14,XarbzantedeschiaeCFBP7410_Z41000208)m13,XarbfragariaeCFBP6762_F76200476)m12,XarbcelebensisNCPPB1630_C63003402)m11,XarbcorylinaNCCB100457_C45702662)m10,XarbarracaciaeCFBP7407_A40703492)m9,((XarbcorylinaCFBP2565_C56501087,((((XarbfragariaeCFBP6773_F77303249,XarbcelebensisNCPPB1832_C83201198)m34,(XarbfragariaeLMG19144_F14401556,XarbfragariaeLMG19145_F14503963)m37)m33,Xarb30043004_X00402858)m32,XarbfragariaeLMG19146_F14602997)m31)m29,XarbcorylinaCFBP1159_C15903878)m28)m8,(XarbpopuliCFBP3123_P12302108,XarbpopuliCFBP3122_P12201981)m43)m7,XarbjuglandisJ303_J30300624)m6,(XarbjuglandisCFBP7179_J17902355,XarbjuglandisCFBP8253_J25300466)m47)m5,XarbjuglandisCFBP2528_J52802847)m4,XarbjuglandisNCPPB1447_J44701352)m3,((((XarbjuglandisCPBF1521_J52101043,XarbjuglandisCPBF367_J36701398)m55,XarbjuglandisCPBF427_J42702204)m54,XarbjuglandisXaj417_J41702381)m53,XarbjuglandisDW3F3_J3F303077)m52)m2,XarbjuglandisCPBF426_J42601810)m1;

Reconciliation:
XarbpruniIVIA26261_P26100324: Leaf Node
XarbpruniCFBP3894_P89400189: Leaf Node
m15 = LCA[XarbpruniIVIA26261_P26100324, XarbpruniCFBP3894_P89400189]: Speciation, Mapping --> 100
XarbguizotiaeCFBP7409_G40902678: Leaf Node
XarbguizotiaeCFBP7408_G40802512: Leaf Node
m19 = LCA[XarbguizotiaeCFBP7409_G40902678, XarbguizotiaeCFBP7408_G40802512]: Speciation, Mapping --> 100
XgardineriSM40611_X61102614: Leaf Node
m18 = LCA[XarbguizotiaeCFBP7409_G40902678, XgardineriSM40611_X61102614]: Speciation, Mapping --> 100
m14 = LCA[XarbpruniIVIA26261_P26100324, XgardineriSM40611_X61102614]: Transfer, Mapping --> 100, Recipient --> 100
XarbzantedeschiaeCFBP7410_Z41000208: Leaf Node
m13 = LCA[XarbpruniIVIA26261_P26100324, XarbzantedeschiaeCFBP7410_Z41000208]: Transfer, Mapping --> XarbzantedeschiaeCFBP7410, Recipient --> 100
XarbfragariaeCFBP6762_F76200476: Leaf Node
m12 = LCA[XarbpruniIVIA26261_P26100324, XarbfragariaeCFBP6762_F76200476]: Transfer, Mapping --> XarbzantedeschiaeCFBP7410, Recipient --> XarbfragariaeCFBP6762
XarbcelebensisNCPPB1630_C63003402: Leaf Node
m11 = LCA[XarbpruniIVIA26261_P26100324, XarbcelebensisNCPPB1630_C63003402]: Transfer, Mapping --> XarbzantedeschiaeCFBP7410, Recipient --> XarbcelebensisNCPPB1630
XarbcorylinaNCCB100457_C45702662: Leaf Node
m10 = LCA[XarbpruniIVIA26261_P26100324, XarbcorylinaNCCB100457_C45702662]: Transfer, Mapping --> XarbzantedeschiaeCFBP7410, Recipient --> XarbcorylinaNCCB100457
XarbarracaciaeCFBP7407_A40703492: Leaf Node
m9 = LCA[XarbpruniIVIA26261_P26100324, XarbarracaciaeCFBP7407_A40703492]: Speciation, Mapping --> 25
XarbcorylinaCFBP2565_C56501087: Leaf Node
XarbfragariaeCFBP6773_F77303249: Leaf Node
XarbcelebensisNCPPB1832_C83201198: Leaf Node
m34 = LCA[XarbfragariaeCFBP6773_F77303249, XarbcelebensisNCPPB1832_C83201198]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeCFBP6773
XarbfragariaeLMG19144_F14401556: Leaf Node
XarbfragariaeLMG19145_F14503963: Leaf Node
m37 = LCA[XarbfragariaeLMG19144_F14401556, XarbfragariaeLMG19145_F14503963]: Transfer, Mapping --> XarbfragariaeLMG19144, Recipient --> XarbfragariaeLMG19145
m33 = LCA[XarbfragariaeCFBP6773_F77303249, XarbfragariaeLMG19145_F14503963]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> XarbfragariaeLMG19144
Xarb30043004_X00402858: Leaf Node
m32 = LCA[XarbfragariaeCFBP6773_F77303249, Xarb30043004_X00402858]: Transfer, Mapping --> XarbcelebensisNCPPB1832, Recipient --> Xarb30043004
XarbfragariaeLMG19146_F14602997: Leaf Node
m31 = LCA[XarbfragariaeCFBP6773_F77303249, XarbfragariaeLMG19146_F14602997]: Speciation, Mapping --> 100
m29 = LCA[XarbcorylinaCFBP2565_C56501087, XarbfragariaeLMG19146_F14602997]: Transfer, Mapping --> XarbcorylinaCFBP2565, Recipient --> 100
XarbcorylinaCFBP1159_C15903878: Leaf Node
m28 = LCA[XarbcorylinaCFBP2565_C56501087, XarbcorylinaCFBP1159_C15903878]: Speciation, Mapping --> 100
m8 = LCA[XarbpruniIVIA26261_P26100324, XarbcorylinaCFBP1159_C15903878]: Speciation, Mapping --> 25
XarbpopuliCFBP3123_P12302108: Leaf Node
XarbpopuliCFBP3122_P12201981: Leaf Node
m43 = LCA[XarbpopuliCFBP3123_P12302108, XarbpopuliCFBP3122_P12201981]: Speciation, Mapping --> 100
m7 = LCA[XarbpruniIVIA26261_P26100324, XarbpopuliCFBP3122_P12201981]: Transfer, Mapping --> 100, Recipient --> 25
XarbjuglandisJ303_J30300624: Leaf Node
m6 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisJ303_J30300624]: Transfer, Mapping --> XarbjuglandisJ303, Recipient --> 100
XarbjuglandisCFBP7179_J17902355: Leaf Node
XarbjuglandisCFBP8253_J25300466: Leaf Node
m47 = LCA[XarbjuglandisCFBP7179_J17902355, XarbjuglandisCFBP8253_J25300466]: Transfer, Mapping --> 98, Recipient --> XarbjuglandisCFBP7179
m5 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisCFBP8253_J25300466]: Speciation, Mapping --> 100
XarbjuglandisCFBP2528_J52802847: Leaf Node
m4 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisCFBP2528_J52802847]: Transfer, Mapping --> XarbjuglandisCFBP2528, Recipient --> 100
XarbjuglandisNCPPB1447_J44701352: Leaf Node
m3 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisNCPPB1447_J44701352]: Speciation, Mapping --> 100
XarbjuglandisCPBF1521_J52101043: Leaf Node
XarbjuglandisCPBF367_J36701398: Leaf Node
m55 = LCA[XarbjuglandisCPBF1521_J52101043, XarbjuglandisCPBF367_J36701398]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> XarbjuglandisCPBF367
XarbjuglandisCPBF427_J42702204: Leaf Node
m54 = LCA[XarbjuglandisCPBF1521_J52101043, XarbjuglandisCPBF427_J42702204]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41702381: Leaf Node
m53 = LCA[XarbjuglandisCPBF1521_J52101043, XarbjuglandisXaj417_J41702381]: Speciation, Mapping --> 100
XarbjuglandisDW3F3_J3F303077: Leaf Node
m52 = LCA[XarbjuglandisCPBF1521_J52101043, XarbjuglandisDW3F3_J3F303077]: Transfer, Mapping --> XarbjuglandisDW3F3, Recipient --> 100
m2 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisDW3F3_J3F303077]: Speciation, Mapping --> 100
XarbjuglandisCPBF426_J42601810: Leaf Node
m1 = LCA[XarbpruniIVIA26261_P26100324, XarbjuglandisCPBF426_J42601810]: Transfer, Mapping --> XarbjuglandisCPBF426, Recipient --> 100

The minimum reconciliation cost is: 62 (Duplications: 0, Transfers: 17, Losses: 11)
Total number of optimal solutions: 384
Total number of candidates for gene birth: 2