------------ Reconciliation for Gene Tree 1 (rooted) -------------
Species Tree: 
(XarbfragariaeLMG19145,(Xarb30043004,(XarbfragariaeLMG19144,(((((XarbpopuliCFBP3123,XarbpopuliCFBP3122)100,((XarbjuglandisCPBF367,XarbjuglandisCPBF426)100,XgardineriSM40611)78)100,(XarbguizotiaeCFBP7409,XarbguizotiaeCFBP7408)100)100,(((XarbarracaciaeCFBP7407,XarbzantedeschiaeCFBP7410)25,(XarbfragariaeCFBP6762,(((XarbcorylinaCFBP1159,(XarbcorylinaCFBP2565,XarbcorylinaNCCB100457)100)100,(XarbpruniCFBP3894,XarbpruniIVIA26261)100)100,((XarbjuglandisDW3F3,(XarbjuglandisCFBP7179,(XarbjuglandisNCPPB1447,XarbjuglandisCFBP2528)100)100)100,((XarbjuglandisJ303,(XarbjuglandisCPBF1521,XarbjuglandisCPBF427)100)100,(XarbjuglandisXaj417,XarbjuglandisCFBP8253)98)100)100)100)25)25,(XarbcelebensisNCPPB1630,(XarbcelebensisNCPPB1832,XarbfragariaeLMG19146)100)100)25)100,XarbfragariaeCFBP6773)56)100)n2)n1;

Gene Tree: 
((((((((((((XarbpruniCFBP3894_P89400188,XarbpruniIVIA26261_P26100325)m12,Xarb30043004_X00402857)m11,XarbcelebensisNCPPB1832_C83201197)m10,XarbcorylinaNCCB100457_C45702663)m9,(((((XarbcorylinaCFBP1159_C15903877,XarbcorylinaCFBP2565_C56501088)m22,(((XarbzantedeschiaeCFBP7410_Z41000207,XarbfragariaeCFBP6762_F76200475)m27,XarbfragariaeLMG19145_F14503962)m26,(XarbfragariaeLMG19144_F14401555,XarbfragariaeCFBP6773_F77303248)m31)m25)m21,XarbfragariaeLMG19146_F14602996)m20,XarbcelebensisNCPPB1630_C63003403)m19,XarbarracaciaeCFBP7407_A40703491)m18)m8,(XarbguizotiaeCFBP7408_G40802513,XarbguizotiaeCFBP7409_G40902677)m37)m7,XarbjuglandisCPBF1521_J52101042)m6,XarbjuglandisCPBF427_J42702203)m5,XarbjuglandisXaj417_J41702382)m4,(((((XarbjuglandisCFBP7179_J17902354,(XarbjuglandisCFBP2528_J52802846,XarbjuglandisNCPPB1447_J44701351)m49)m47,XarbjuglandisCPBF426_J42601809)m46,XarbjuglandisCFBP8253_J25300467)m45,XarbjuglandisDW3F3_J3F303076)m44,XarbjuglandisJ303_J30300625)m43)m3,((XarbpopuliCFBP3123_P12302107,XarbpopuliCFBP3122_P12201982)m57,XgardineriSM40611_X61102615)m56)m2,XarbjuglandisCPBF367_J36701397)m1;

Reconciliation:
XarbpruniCFBP3894_P89400188: Leaf Node
XarbpruniIVIA26261_P26100325: Leaf Node
m12 = LCA[XarbpruniCFBP3894_P89400188, XarbpruniIVIA26261_P26100325]: Speciation, Mapping --> 100
Xarb30043004_X00402857: Leaf Node
m11 = LCA[XarbpruniCFBP3894_P89400188, Xarb30043004_X00402857]: Transfer, Mapping --> Xarb30043004, Recipient --> 100
XarbcelebensisNCPPB1832_C83201197: Leaf Node
m10 = LCA[XarbpruniCFBP3894_P89400188, XarbcelebensisNCPPB1832_C83201197]: Transfer, Mapping --> Xarb30043004, Recipient --> XarbcelebensisNCPPB1832
XarbcorylinaNCCB100457_C45702663: Leaf Node
m9 = LCA[XarbpruniCFBP3894_P89400188, XarbcorylinaNCCB100457_C45702663]: Transfer, Mapping --> Xarb30043004, Recipient --> XarbcorylinaNCCB100457
XarbcorylinaCFBP1159_C15903877: Leaf Node
XarbcorylinaCFBP2565_C56501088: Leaf Node
m22 = LCA[XarbcorylinaCFBP1159_C15903877, XarbcorylinaCFBP2565_C56501088]: Speciation, Mapping --> 100
XarbzantedeschiaeCFBP7410_Z41000207: Leaf Node
XarbfragariaeCFBP6762_F76200475: Leaf Node
m27 = LCA[XarbzantedeschiaeCFBP7410_Z41000207, XarbfragariaeCFBP6762_F76200475]: Speciation, Mapping --> 25
XarbfragariaeLMG19145_F14503962: Leaf Node
m26 = LCA[XarbzantedeschiaeCFBP7410_Z41000207, XarbfragariaeLMG19145_F14503962]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 25
XarbfragariaeLMG19144_F14401555: Leaf Node
XarbfragariaeCFBP6773_F77303248: Leaf Node
m31 = LCA[XarbfragariaeLMG19144_F14401555, XarbfragariaeCFBP6773_F77303248]: Speciation, Mapping --> 100
m25 = LCA[XarbzantedeschiaeCFBP7410_Z41000207, XarbfragariaeCFBP6773_F77303248]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 100
m21 = LCA[XarbcorylinaCFBP1159_C15903877, XarbfragariaeCFBP6773_F77303248]: Transfer, Mapping --> XarbfragariaeLMG19145, Recipient --> 100
XarbfragariaeLMG19146_F14602996: Leaf Node
m20 = LCA[XarbcorylinaCFBP1159_C15903877, XarbfragariaeLMG19146_F14602996]: Transfer, Mapping --> XarbfragariaeLMG19146, Recipient --> XarbfragariaeLMG19145
XarbcelebensisNCPPB1630_C63003403: Leaf Node
m19 = LCA[XarbcorylinaCFBP1159_C15903877, XarbcelebensisNCPPB1630_C63003403]: Speciation, Mapping --> 100
XarbarracaciaeCFBP7407_A40703491: Leaf Node
m18 = LCA[XarbcorylinaCFBP1159_C15903877, XarbarracaciaeCFBP7407_A40703491]: Speciation, Mapping --> 25
m8 = LCA[XarbpruniCFBP3894_P89400188, XarbarracaciaeCFBP7407_A40703491]: Transfer, Mapping --> Xarb30043004, Recipient --> 25
XarbguizotiaeCFBP7408_G40802513: Leaf Node
XarbguizotiaeCFBP7409_G40902677: Leaf Node
m37 = LCA[XarbguizotiaeCFBP7408_G40802513, XarbguizotiaeCFBP7409_G40902677]: Speciation, Mapping --> 100
m7 = LCA[XarbpruniCFBP3894_P89400188, XarbguizotiaeCFBP7409_G40902677]: Transfer, Mapping --> 100, Recipient --> Xarb30043004
XarbjuglandisCPBF1521_J52101042: Leaf Node
m6 = LCA[XarbpruniCFBP3894_P89400188, XarbjuglandisCPBF1521_J52101042]: Transfer, Mapping --> XarbjuglandisCPBF1521, Recipient --> 100
XarbjuglandisCPBF427_J42702203: Leaf Node
m5 = LCA[XarbpruniCFBP3894_P89400188, XarbjuglandisCPBF427_J42702203]: Speciation, Mapping --> 100
XarbjuglandisXaj417_J41702382: Leaf Node
m4 = LCA[XarbpruniCFBP3894_P89400188, XarbjuglandisXaj417_J41702382]: Speciation, Mapping --> 100
XarbjuglandisCFBP7179_J17902354: Leaf Node
XarbjuglandisCFBP2528_J52802846: Leaf Node
XarbjuglandisNCPPB1447_J44701351: Leaf Node
m49 = LCA[XarbjuglandisCFBP2528_J52802846, XarbjuglandisNCPPB1447_J44701351]: Speciation, Mapping --> 100
m47 = LCA[XarbjuglandisCFBP7179_J17902354, XarbjuglandisNCPPB1447_J44701351]: Speciation, Mapping --> 100
XarbjuglandisCPBF426_J42601809: Leaf Node
m46 = LCA[XarbjuglandisCFBP7179_J17902354, XarbjuglandisCPBF426_J42601809]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisCPBF426
XarbjuglandisCFBP8253_J25300467: Leaf Node
m45 = LCA[XarbjuglandisCFBP7179_J17902354, XarbjuglandisCFBP8253_J25300467]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisCFBP8253
XarbjuglandisDW3F3_J3F303076: Leaf Node
m44 = LCA[XarbjuglandisCFBP7179_J17902354, XarbjuglandisDW3F3_J3F303076]: Speciation, Mapping --> 100
XarbjuglandisJ303_J30300625: Leaf Node
m43 = LCA[XarbjuglandisCFBP7179_J17902354, XarbjuglandisJ303_J30300625]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisJ303
m3 = LCA[XarbpruniCFBP3894_P89400188, XarbjuglandisJ303_J30300625]: Speciation, Mapping --> 100
XarbpopuliCFBP3123_P12302107: Leaf Node
XarbpopuliCFBP3122_P12201982: Leaf Node
m57 = LCA[XarbpopuliCFBP3123_P12302107, XarbpopuliCFBP3122_P12201982]: Speciation, Mapping --> 100
XgardineriSM40611_X61102615: Leaf Node
m56 = LCA[XarbpopuliCFBP3123_P12302107, XgardineriSM40611_X61102615]: Speciation, Mapping --> 100
m2 = LCA[XarbpruniCFBP3894_P89400188, XgardineriSM40611_X61102615]: Transfer, Mapping --> 100, Recipient --> 100
XarbjuglandisCPBF367_J36701397: Leaf Node
m1 = LCA[XarbpruniCFBP3894_P89400188, XarbjuglandisCPBF367_J36701397]: Transfer, Mapping --> 100, Recipient --> XarbjuglandisCPBF367

The minimum reconciliation cost is: 55 (Duplications: 0, Transfers: 15, Losses: 10)
Total number of optimal solutions: 198
Total number of candidates for gene birth: 3